Characterization of a new HLA-B39 allele, B*3913, in a Brazilian Caucasian

Tissue Antigens. 1998 Dec;52(6):583-6. doi: 10.1111/j.1399-0039.1998.tb03091.x.

Abstract

A panel of samples, previously typed by serology, was retyped using a line probe assay. One sample from a Brazilian Caucasian individual was serologically typed as B52/B39, but showed an aberrant HLA-B pattern on the diagnostic strip and was typed as B*52012/B*39new. Further analysis by allele-specific amplification and subsequent sequencing of exons 2 and 3 revealed a G(B*3908)-to-T nucleotide substitution at position 467 (codon 156) resulting in an Arg (B*3908)-to-Leu substitution. Furthermore, the sequence revealed a silent mutation at position 174 (codon 58): a G(B*3908)-to-A nucleotide switch. The sequence has been sent to the EMBL databank and the HLA Nomenclature Committee, and the allele was named B*3913.

MeSH terms

  • Alleles*
  • Amino Acid Sequence
  • Base Sequence
  • Brazil
  • DNA, Complementary
  • HLA-B Antigens / genetics*
  • HLA-B39 Antigen
  • Humans
  • Molecular Sequence Data
  • White People / genetics*

Substances

  • DNA, Complementary
  • HLA-B Antigens
  • HLA-B39 Antigen

Associated data

  • GENBANK/AJ223282