Sequence of the VP7 gene of an atypical human rotavirus: evidence for genetic and antigenic drift

DNA Seq. 1997;7(5):307-11. doi: 10.3109/10425179709034050.

Abstract

The nucleotide sequence of the gene encoding the outer capsid glycoprotein, VP7, isolated from a reassortant human rotavirus, M3014, was determined. The deduced amino acid sequence exhibited significant identity to the VP7 from a standard strain belonging to serotype G4, although the antigenic regions of the M3014 VP7 resembled sequences from both serotype G4 and G9 viruses. However, reactivity with G4 or G9 serotype-specific monoclonal antibodies was not observed. We suggest that the M3014 VP7 was derived from sequential mutation of a G4-like progenitor gene resulting in a protein with novel antigenic properties.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Antigenic Variation*
  • Antigens, Viral / chemistry
  • Antigens, Viral / genetics*
  • Base Sequence
  • Capsid / chemistry
  • Capsid / genetics*
  • Capsid Proteins*
  • Cloning, Molecular
  • Genes, Viral*
  • Humans
  • Molecular Sequence Data
  • Reassortant Viruses / genetics
  • Rotavirus / chemistry
  • Rotavirus / classification
  • Rotavirus / genetics*
  • Rotavirus / immunology
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Serotyping

Substances

  • Antigens, Viral
  • Capsid Proteins
  • VP7 protein, Rotavirus

Associated data

  • GENBANK/X99126