Structure and characterization of the human tissue inhibitor of metalloproteinases-2 gene

J Biol Chem. 1996 Oct 11;271(41):25498-505. doi: 10.1074/jbc.271.41.25498.

Abstract

We report here the characterization of the human tissue inhibitor of metalloproteinases-2 (TIMP-2) gene. The gene is 83 kilobase pairs (kb) long with exon-intron splicing sites located in preserved positions among the three members of the TIMP family. A 2.6-kb genomic DNA fragment flanking the 5'-end of the gene contains several regulatory elements including five Sp1, two AP-2, one AP-1, and three PEA-3 binding sites. Despite the presence of a complete AP-1 consensus at position -281, the promoter did not respond to 12-O-tetradecanoylphorbol-13-acetate treatment. However, 12-O-tetradecanoylphorbol-13-acetate response was generated by insertion of a similar AP-1 consensus at position -71, indicating the importance of the positioning of this motif. The promoter contains a typical CpG island; however, methylation of this island did not seem to influence gene expression. Analysis of the 3'-end of the gene revealed that the two mRNAs for TIMP-2 (1.2 and 3.8 kb) differ by the selection of their polyadenylation signal sites, but selection of these sites does not affect RNA stability. In summary, the TIMP-2 gene has several features observed in housekeeping genes, and differs significantly from TIMP-1 and TIMP-3 genes. These differences are likely to explain the specific roles that these inhibitors play in the regulation of matrix metalloproteinases.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Binding Sites
  • Consensus Sequence
  • Conserved Sequence
  • DNA Methylation
  • DNA-Binding Proteins / metabolism
  • Exons
  • Humans
  • Introns
  • Molecular Sequence Data
  • Multigene Family
  • Promoter Regions, Genetic
  • Protein Biosynthesis*
  • Proteins / genetics*
  • RNA Splicing
  • RNA, Messenger / biosynthesis
  • Regulatory Sequences, Nucleic Acid
  • Sp1 Transcription Factor / metabolism
  • Tetradecanoylphorbol Acetate / pharmacology
  • Tissue Inhibitor of Metalloproteinase-2
  • Transcription Factor AP-1 / metabolism
  • Transcription Factor AP-2
  • Transcription Factors / metabolism*

Substances

  • DNA-Binding Proteins
  • Proteins
  • RNA, Messenger
  • Sp1 Transcription Factor
  • Transcription Factor AP-1
  • Transcription Factor AP-2
  • Transcription Factors
  • transcription factor PEA3
  • Tissue Inhibitor of Metalloproteinase-2
  • Tetradecanoylphorbol Acetate

Associated data

  • GENBANK/U44381
  • GENBANK/U44382
  • GENBANK/U44383
  • GENBANK/U44384
  • GENBANK/U44385