New types of large-pore polyacrylamide-agarose mixed-bed matrices for DNA electrophoresis: pore size estimation from Ferguson plots of DNA fragments

Electrophoresis. 1995 Aug;16(8):1337-44. doi: 10.1002/elps.11501601221.

Abstract

The average pore size value of gels containing polyacrylamide, covalently linked to agarose, was found to be 30% higher than the value of a regular N,N'-methylenebisacrylamide (Bis) cross-linked gel of the same %T. By increasing the agarose concentration (10% of the total amount of polyacrylamide), gels containing low amounts of acrylamide (1.5-2%) are reproducibly obtained; their pore sizes are 130% larger than the pore sizes of a 4%T, 3.3%C polyacrylamide gel. In general, mixed-bed matrices were found to be more elastic and mechanically stronger than classical polyacrylamide gels since an agarose-induced gelation process takes place during their polymerization.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acrylic Resins / chemistry
  • Chemical Phenomena
  • Chemistry, Physical
  • DNA / analysis*
  • Electrophoresis, Agar Gel / instrumentation
  • Electrophoresis, Agar Gel / methods*
  • Electrophoresis, Agar Gel / statistics & numerical data
  • Electrophoresis, Polyacrylamide Gel / instrumentation
  • Electrophoresis, Polyacrylamide Gel / methods*
  • Electrophoresis, Polyacrylamide Gel / statistics & numerical data
  • Molecular Weight
  • Plasmids
  • Polymers / chemistry
  • Sepharose / chemistry

Substances

  • Acrylic Resins
  • Polymers
  • polyacrylamide gels
  • DNA
  • Sepharose