Chromosomal organization and nucleotide sequence of the fus-gene encoding elongation factor 2 (EF-2) of the hyperthermophilic archaeum Pyrococcus woesei

FEMS Microbiol Lett. 1995 Feb 1;126(1):85-90. doi: 10.1111/j.1574-6968.1995.tb07395.x.

Abstract

A Pyrococcus woesei EcoRI DNA fragment (3400 bp) harbouring the gene fus for elongation factor 2 (EF-2) was cloned and almost completely sequenced. Unlike Methanococcus vannielii (which displays the 'str operon'-like fus and tuf gene context, 5'-rps12-rps7-fus-tuf-3'), and similar to Sulfolobus acidocaldarius and Desulfurococcus mobilis, the Pyrococcus fus gene (732 codons) is unlinked to the rps and tuf genes, and is immediately followed (57 bp intergenic spacing) by an ORF of 106 codons. Both ORFs are preceded by potential archaeal promoters located 52 bp (for fus) and 37 bp (for ORF106) upstream of the putative start codons. The Pyrococcus EF-2(G) equivalent factor is somewhat closer to the eukaryal than to the bacterial homolog, and also shares with the former the C-terminal sequence required for ADP ribosylation of EF-2 by Diphtheria toxin.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Archaea / genetics*
  • Base Sequence
  • Chromosomes, Bacterial / genetics
  • Cloning, Molecular
  • Conserved Sequence
  • Genes, Bacterial / genetics*
  • Molecular Sequence Data
  • Peptide Elongation Factor 2
  • Peptide Elongation Factors / genetics*
  • Sequence Analysis, DNA

Substances

  • Peptide Elongation Factor 2
  • Peptide Elongation Factors

Associated data

  • GENBANK/X67205
  • GENBANK/X74277