Identification of a transcriptional regulatory region of the rat pancreatitis-associated protein I (PAP I) gene that confers tissue specificity

Biochem J. 1995 Oct 15;311 ( Pt 2)(Pt 2):643-7. doi: 10.1042/bj3110643.

Abstract

We have previously characterized the rat pancreatitis-associated protein I (PAP I) gene by nucleotide sequencing. We describe in this paper its promoter region by analysing the regulatory functions associated with the DNA sequence comprising nt -1253 to + 10 of the gene. That sequence strongly promoted the transcription of the promotorless chloramphenicol acetyltranferase (CAT) gene in cells of pancreatic origin (AR-42J) but not in cells of non-pancreatic origin (Rat 2 and IEC 6). The influence on CAT expression of stepwise 5' deletions in the promoter sequence was monitored in the three cell lines. In pancreatic AR-42J cells, deletion down to position -926 did not affect significantly the expression of the reporter gene. Deletion to nt -685 caused about a 30% decrease in expression. Extending the deletion to nt -444 did not have any additional effect, but a further deletion to nt -180, resulted in a reduction to about 25%. Moreover, deletion from nt -180 to -118 resulted in a further reduction to about one-third of that. Finally, deletion down to nt -61 further reduced activity by a factor of 3, although it remained above background. These results suggest the presence of several positive cis-acting elements in the PAP I promoter. In non-pancreatic cells, CAT expression remained very low when the promoter was deleted down to nt -180. Yet, deletion from -180 to -118 significantly increased CAT expression, suggesting suppression of a negative cis-acting element. Further deletion down to nt -61 decreased CAT activity by a factor of 5. The region between nt -180 and -61 was subjected to footprint analysis. A similar pattern of DNase protection was obtained with AR-42J and Rat 2 nuclear extracts, the only protected region extending from nt -125 to -95. That region was further analysed by inserting the nt -180 to -81 fragment, in both orientations, upstream of thymidine kinase (TK) or simian virus 40 (SV40) promoter-CAT constructs. In all cases CAT expression was increased in pancreatic cells but reduced in Rat 2 cells. These results indicated the presence of cell-specific positive and negative elements within that region.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acute-Phase Proteins / biosynthesis
  • Acute-Phase Proteins / genetics*
  • Animals
  • Antigens, Neoplasm*
  • Base Sequence
  • Biomarkers, Tumor*
  • Cell Line
  • Cells, Cultured
  • Chloramphenicol O-Acetyltransferase / biosynthesis
  • Chloramphenicol O-Acetyltransferase / genetics
  • DNA Primers / chemistry
  • Gene Expression Regulation*
  • Genes, Regulator / genetics*
  • Lectins / genetics
  • Lectins, C-Type*
  • Molecular Sequence Data
  • Organ Specificity
  • Pancreas / cytology
  • Pancreas / metabolism
  • Pancreatitis-Associated Proteins
  • Promoter Regions, Genetic / genetics
  • RNA, Messenger / biosynthesis
  • Rats
  • Regulatory Sequences, Nucleic Acid
  • Transcription, Genetic / genetics*

Substances

  • Acute-Phase Proteins
  • Antigens, Neoplasm
  • Biomarkers, Tumor
  • DNA Primers
  • Lectins
  • Lectins, C-Type
  • Pancreatitis-Associated Proteins
  • REG3A protein, human
  • RNA, Messenger
  • Reg3b protein, rat
  • Chloramphenicol O-Acetyltransferase