Draft genome sequence of Escherichia coli MTR_GS_S1457 strain isolated from a soil sample of a vegetable garden in Gazipur, Bangladesh

Md Saiful Islam; Pritom Kumar Pramanik; Md Liton Rana; Md Ashek Ullah; Fahim Haque Neloy; Srinivasan Ramasamy; Pepijn Schreinemachers; Ricardo Oliva; Md Tanvir Rahman

doi:10.1128/mra.00021-24

Draft genome sequence of Escherichia coli MTR_GS_S1457 strain isolated from a soil sample of a vegetable garden in Gazipur, Bangladesh

Microbiol Resour Announc. 2024 May 17:e0002124. doi: 10.1128/mra.00021-24. Online ahead of print.

Authors

Md Saiful Islam^{1

2}, Pritom Kumar Pramanik¹, Md Liton Rana¹, Md Ashek Ullah¹, Fahim Haque Neloy¹, Srinivasan Ramasamy³, Pepijn Schreinemachers⁴, Ricardo Oliva³, Md Tanvir Rahman¹

Affiliations

¹ Department of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, Bangladesh.
² Department of Animal Sciences, University of California-Davis, Davis, California, USA.
³ Safe and Sustainable Value Chains Flagship Program, World Vegetable Center, Shanhua, Tainan, Taiwan.
⁴ Healthy Diets and Enabling Impact Flagship Programs, World Vegetable Center-East and Southeast Asia, Bangkok, Thailand.

PMID: 38757962
DOI: 10.1128/mra.00021-24

Abstract

We announce the sequence of the Escherichia coli MTR_GS_S1457 strain isolated from a soil sample of a vegetable gardening system for the first time in Bangladesh. With a length of 4,918,647 bp, this strain contained one plasmid, two CRISPR arrays, 54 predicted antibiotic resistance genes, and 81 predicted virulence factor genes.

Keywords: Bangladesh; Escherichia coli; environment; soil; vegetable gardening system; whole-genome sequencing.