Comprehensive identification of maize ZmE2F transcription factors and the positive role of ZmE2F6 in response to drought stress

BMC Genomics. 2024 May 13;25(1):465. doi: 10.1186/s12864-024-10369-0.

Abstract

Background: The early 2 factor (E2F) family is characterized as a kind of transcription factor that plays an important role in cell division, DNA damage repair, and cell size regulation. However, its stress response has not been well revealed.

Results: In this study, ZmE2F members were comprehensively identified in the maize genome, and 21 ZmE2F genes were identified, including eight E2F subclade members, seven DEL subfamily genes, and six DP genes. All ZmE2F proteins possessed the DNA-binding domain (DBD) characterized by conserved motif 1 with the RRIYD sequence. The ZmE2F genes were unevenly distributed on eight maize chromosomes, showed diversity in gene structure, expanded by gene duplication, and contained abundant stress-responsive elements in their promoter regions. Subsequently, the ZmE2F6 gene was cloned and functionally verified in drought response. The results showed that the ZmE2F6 protein interacted with ZmPP2C26, localized in the nucleus, and responded to drought treatment. The overexpression of ZmE2F6 enhanced drought tolerance in transgenic Arabidopsis with longer root length, higher survival rate, and biomass by upregulating stress-related gene transcription.

Conclusions: This study provides novel insights into a greater understanding and functional study of the E2F family in the stress response.

Keywords: Drought stress; E2F; Expression; Maize; Transcription factor.

MeSH terms

  • Arabidopsis / genetics
  • Chromosomes, Plant / genetics
  • Droughts*
  • Gene Expression Regulation, Plant*
  • Phylogeny
  • Plant Proteins* / genetics
  • Plant Proteins* / metabolism
  • Plants, Genetically Modified
  • Promoter Regions, Genetic
  • Stress, Physiological* / genetics
  • Transcription Factors* / genetics
  • Transcription Factors* / metabolism
  • Zea mays* / genetics
  • Zea mays* / metabolism

Substances

  • Plant Proteins
  • Transcription Factors