ACRE, a class of AP2/ERF transcription factors, activates the expression of sweet potato ß-amylase and sporamin genes through the sugar-responsible element CMSRE-1

Plant Mol Biol. 2024 May 7;114(3):54. doi: 10.1007/s11103-024-01450-z.

Abstract

Sugars, synthesized by photosynthesis in source organs, are loaded and utilized as an energy source and carbon skeleton in sink organs, and also known to be important signal molecules regulating gene expression in higher plants. The expression of genes coding for sporamin and β-amylase, the two most abundant proteins in storage roots of sweet potato, is coordinately induced by sugars. We previously reported on the identification of the carbohydrate metabolic signal-responsible element-1 (CMSRE-1) essential for the sugar-responsible expression of two genes. However, transcription factors that bind to this sequence have not been identified. In this study, we performed yeast one-hybrid screening using the sugar-responsible minimal promoter region of the ß-amylase gene as bait and a library composed only transcription factor cDNAs of Arabidopsis. Two clones, named Activator protein binding to CMSRE-1 (ACRE), encoding AP2/ERF transcription factors were isolated. ACRE showed transactivation activity of the sugar-responsible minimal promoter in a CMSRE-1-dependent manner in Arabidopsis protoplasts. Electric mobility shift assay (EMSA) using recombinant proteins and transient co-expression assay in Arabidopsis protoplasts revealed that ACRE could actually act to the CMSRE-1. Among the DEHYDRATION -RESPONSIVE ELEMENT BINDING FACTOR (DREB) subfamily, almost all homologs including ACRE, could act on the DRE, while only three ACREs could act to the CMSRE-1. Moreover, ACRE-homologs of Japanese morning glory also have the same property of DNA-binding preference and transactivation activity through the CMSRE-1. These findings suggested that ACRE plays an important role in the mechanism regulating the sugar-responsible gene expression through the CMSRE-1 conserved across plant species.

Keywords: Arabidopsis thaliana; Ipomoea nil; AP2/ERF; Gene expressions; Sugar induction; Transcription factor.

MeSH terms

  • Arabidopsis* / genetics
  • Arabidopsis* / metabolism
  • Gene Expression Regulation, Plant*
  • Ipomoea batatas* / genetics
  • Ipomoea batatas* / metabolism
  • Phylogeny
  • Plant Proteins* / genetics
  • Plant Proteins* / metabolism
  • Promoter Regions, Genetic* / genetics
  • Transcription Factors* / genetics
  • Transcription Factors* / metabolism
  • Transcriptional Activation / genetics
  • beta-Amylase* / genetics
  • beta-Amylase* / metabolism

Substances

  • Plant Proteins
  • beta-Amylase
  • Transcription Factors