Biodegradation of acetaminophen: Microcosm centric genomic-proteomic-metabolomics evidences

Bioresour Technol. 2024 Jun:401:130732. doi: 10.1016/j.biortech.2024.130732. Epub 2024 Apr 25.

Abstract

Acetaminophen (APAP) is a frequently used, over-the-counter analgesic and antipyretic medication. Considering increase in global consumption, its ubiquity in environment with potential toxic impacts has become a cause of great concern. Hence, bioremediation of this emerging contaminant is of paramount significance. The present study incorporates a microcosm centric omics approach to gain in-depth insights into APAP degradation by Paracoccus sp. APAP_BH8. It can metabolize APAP (300 mg kg-1) within 16 days in soil microcosms. Genome analysis revealed potential genes capable of mediating degradation includes M20 aminoacylase family protein, guanidine deaminase, 4-hydroxybenzoate 3-monooxygenase, and 4-hydroxyphenylpyruvate dioxygenase. Whole proteome analysis showed differential expression of enzymes and bioinformatics provided evidence for stable binding of intermediates at the active site of considered enzymes. Metabolites identified were 4-aminophenol, hydroquinone, and 3-hydroxy-cis, cis-muconate. Therefore, Paracoccus sp. APAP_BH8 with versatile enzymatic and genetic attributes can be a promising candidate for formulating improved in situ APAP bioremediation strategies.

Keywords: Acetaminophen; Bacterial degradation; Degradation kinetics; Microcosms; Multi-omics approaches.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetaminophen* / metabolism
  • Biodegradation, Environmental*
  • Genomics* / methods
  • Metabolomics
  • Paracoccus / genetics
  • Paracoccus / metabolism
  • Proteome / metabolism
  • Proteomics* / methods

Substances

  • Acetaminophen
  • Proteome