Association of the IFNG +874T/A Polymorphism with Symptomatic COVID-19 Susceptibility

Viruses. 2024 Apr 22;16(4):650. doi: 10.3390/v16040650.

Abstract

Tumor necrosis factor (TNF) and interferon-gamma (IFNγ) are important inflammatory mediators in the development of cytokine storm syndrome (CSS). Single nucleotide polymorphisms (SNPs) regulate the expression of these cytokines, making host genetics a key factor in the prognosis of COVID-19. In this study, we investigated the associations of the TNF -308G/A and IFNG +874T/A polymorphisms with COVID-19. We analyzed the frequencies of the two polymorphisms in the control groups (CG: TNF -308G/A, n = 497; IFNG +874T/A, n = 397), a group of patients with COVID-19 (CoV, n = 222) and among the subgroups of patients with nonsevere (n = 150) and severe (n = 72) COVID-19. We found no significant difference between the genotypic and allelic frequencies of TNF -308G/A in the groups analyzed; however, both the frequencies of the high expression genotype (TT) (CoV: 13.51% vs. CG: 6.30%; p = 0.003) and the *T allele (CoV: 33.56% vs. CG: 24. 81%; p = 0.001) of the IFNG +874T/A polymorphism were higher in the COVID-19 group than in the control group, with no differences between the subgroups of patients with nonsevere and severe COVID-19. The *T allele of IFNG +874T/A (rs2430561) is associated with susceptibility to symptomatic COVID-19. These SNPs provided valuables clues about the potential mechanism involved in the susceptibility to developing symptomatic COVID-19.

Keywords: COVID-19; IFNG; TNF; host genetics; polymorphisms.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Alleles
  • COVID-19* / genetics
  • COVID-19* / virology
  • Cytokine Release Syndrome / genetics
  • Female
  • Gene Frequency*
  • Genetic Predisposition to Disease*
  • Genotype*
  • Humans
  • Interferon-gamma* / genetics
  • Male
  • Middle Aged
  • Polymorphism, Single Nucleotide*
  • SARS-CoV-2* / genetics
  • Tumor Necrosis Factor-alpha* / genetics

Substances

  • Interferon-gamma
  • Tumor Necrosis Factor-alpha
  • IFNG protein, human
  • TNF protein, human