Low-volume enrichment method supports high throughput bacteriophage screening and isolation from wastewater

PLoS One. 2024 Apr 16;19(4):e0298833. doi: 10.1371/journal.pone.0298833. eCollection 2024.

Abstract

Bacteriophage therapy is a rapidly growing field of study. Narrow host ranges, bacterial resistance, and limited antibiotic availability make lytic phages a feasible therapeutic potential. Phage discovery, a critical step in developing phage therapy, is a pathway to accessible treatment. This has always been a laborious, time-consuming and resource-intensive process. In this paper, we describe a 96-well plate low-volume bacteriophage enrichment method with concentrated environmental sources to rapidly discover and isolate phages targeting multiple organisms simultaneously. Samples from natural water sources, wastewater influent, and activated sludge were tested in large volume enrichment cultures and low-volume 96-well plate format. Each plate has the capacity to run as many as 48 different combinations with multiple bacterial hosts. The time to identify the presence of phage in a sample was 5 to 10 hours in the low-volume format versus a minimum of 2 days in the traditional enrichment method. The labor and expense involved also favor the 96-well plate format. There was some loss of discovered phages using this technique, primarily targeting bacterial species less prevalent in the environment. This is an easily modifiable method that is amenable to automation and a variety of potential phage sources.

MeSH terms

  • Bacteria
  • Bacteriophages*
  • Host Specificity
  • Sewage
  • Wastewater

Substances

  • Wastewater
  • Sewage

Grants and funding

This study was supported in part by the Dr. Louis Skarlow Memorial Trust award (Award number 94798) to OGG-D. The funder was not involved in study design, data collection and analysis, decision to publish, or preparation of the manuscript. There is no website for the foundation - relevant data including Form 990s are publicly available at https://www.causeiq.com/organizations/louis-sklarow-memorial-fund-836720,166201243/