Direct Determination of the Structure of Single Biopolymer Molecules Using Nanopore Sequencing

Biochemistry (Mosc). 2024 Jan;89(Suppl 1):S234-S248. doi: 10.1134/S000629792414013X.

Abstract

This review highlights operational principles, features, and modern aspects of the development of third-generation sequencing technology of biopolymers focusing on the nucleic acids analysis, namely the nanopore sequencing system. Basics of the method and technical solutions used for its realization are considered, from the first works showing the possibility of creation of these systems to the easy-to-handle procedure developed by Oxford Nanopore Technologies company. Moreover, this review focuses on applications, which were developed and realized using equipment developed by the Oxford Nanopore Technologies, including assembly of whole genomes, methagenomics, direct analysis of the presence of modified bases.

Keywords: nanopore sequencing; nanopore sequencing technology; nanopores; pore-forming proteins.

Publication types

  • Review

MeSH terms

  • Biopolymers
  • High-Throughput Nucleotide Sequencing / methods
  • Nanopore Sequencing*
  • Nanopores*
  • Sequence Analysis, DNA / methods

Substances

  • Biopolymers