Diversity and Biotechnological Potential of Cultivable Halophilic and Halotolerant Bacteria from the "Los Negritos" Geothermal Area

Microorganisms. 2024 Feb 27;12(3):482. doi: 10.3390/microorganisms12030482.

Abstract

Soil salinization is negatively affecting soils globally, and the spread of this problem is of great concern due to the loss of functions and benefits offered by the soil resource. In the present study, we explored the diversity of halophilic and halotolerant microorganisms in the arable fraction of a sodic-saline soil without agricultural practices and two soils with agricultural practices (one sodic and one saline) near the geothermal area "Los Negritos" in Villamar, Michoacán state. This was achieved through their isolation and molecular identification, as well as the characterization of their potential for the production of metabolites and enzymes of biotechnological interest under saline conditions. Using culture-dependent techniques, 62 halotolerant and moderately halophilic strains belonging to the genera Bacillus, Brachybacterium, Gracilibacillus, Halobacillus, Halomonas, Kocuria, Marinococcus, Nesterenkonia, Oceanobacillus, Planococcus, Priestia, Salibactetium, Salimicrobium, Salinicoccus, Staphylococcus, Terribacillus, and Virgibacillus were isolated. The different strains synthesized hydrolytic enzymes under 15% (w/v) of salts, as well as metabolites with plant-growth-promoting (PGP) characteristics, such as indole acetic acid (IAA), under saline conditions. Furthermore, the production of biopolymers was detected among the strains; members of Bacillus, Halomonas, Staphylococcus, and Salinicoccus showed extracellular polymeric substance (EPS) production, and the strain Halomonas sp. LNSP3E3-1.2 produced polyhydroxybutyrate (PHB) under 10% (w/v) of total salts.

Keywords: bioprospection; geothermal zone; halophilic bacteria; halotolerant bacteria.

Grants and funding

This study was financially supported by the projects “Secretaría de Investigación y Posgrado-IPN” SIP20180115 and SIP20196729. J.G.-L. received grant-aided support from “Consejo Nacional de Humanidades, Ciencia y Tecnología (CONAHCyT)” and BEIFI-IPN. I.A.-H. and E.Y.T.-G. received grant-aided support from CONAHCyT. P.E.-d.l.S. and M.S.V.-M. received grant-aided support from “Comisión de Operación y Fomento de Actividades Académicas-IPN” and “Estímulos al Desempeño de los Investigadores-IPN” and “Sistema Nacional de Investigadoras e Investigadores (SNII)-CONAHCyT”.