Heterogeneity of chemical modifications on RNA

Biophys Rev. 2023 Oct 17;16(1):79-87. doi: 10.1007/s12551-023-01128-8. eCollection 2024 Feb.

Abstract

The chemical modifications of RNAs broadly impact almost all cellular events and influence various diseases. The rapid advance of sequencing and other technologies opened the door to global methods for profiling all RNA modifications, namely the "epitranscriptome." The mapping of epitranscriptomes in different cells and tissues unveiled that RNA modifications exhibit extensive heterogeneity, in type, amount, and in location. In this mini review, we first introduce the current understanding of modifications on major types of RNAs and the methods that enabled their discovery. We next discuss the tissue and cell heterogeneity of RNA modifications and briefly address the limitations of current technologies. With much still remaining unknown, the development of the epitranscriptomic field lies in the further developments of novel technologies.

Keywords: Epitranscriptome; Heterogeneity; RNA modification; Single-cell RNA sequencing.

Publication types

  • Review