From Molecular Dynamics to Taste Sensory Perception: A Comprehensive Study on the Interaction of Umami Peptides with the T1R1/T1R3-VFT Receptor

J Agric Food Chem. 2024 Mar 27;72(12):6533-6543. doi: 10.1021/acs.jafc.3c09598. Epub 2024 Mar 15.

Abstract

The research on the umami receptor-ligand interaction is crucial for understanding umami perception. This study integrated molecular simulations, sensory evaluation, and biosensor technology to analyze the interaction between umami peptides and the umami receptor T1R1/T1R3-VFT. Molecular dynamics simulations were used to investigate the dissociation process of seven umami peptides with the umami receptor T1R1/T1R3-VFT, and by calculating the potential mean force curve using the Jarzynski equation, it was found that the binding free energy of umami peptide is between -58.80 and -12.17 kcal/mol, which had a strong correlation with the umami intensity obtained by time intensity sensory evaluation. Through correlation analysis, the dissociation rate constants (0.0126-0.394 1/s) of umami peptides were found to have a great impact on umami perception. The faster the dissociation rate of umami peptides from receptors, the stronger the perceived intensity of the umami taste. This research aims to elucidate the relationship between the umami peptide-receptor interaction and umami perception, providing theoretical support for the exploration of umami perception mechanisms.

Keywords: biolayer interferometry; interaction; molecular dynamics simulation; time intensity; umami peptides; umami receptor T1R1/T1R3-VFT.

MeSH terms

  • Molecular Docking Simulation
  • Molecular Dynamics Simulation*
  • Peptides / chemistry
  • Receptors, G-Protein-Coupled / metabolism
  • Taste Perception
  • Taste*

Substances

  • Receptors, G-Protein-Coupled
  • Peptides