Enhancing the authenticity of animal by-products: harmonization of DNA extraction methods from novel ingredients

Front Chem. 2024 Feb 20:12:1350433. doi: 10.3389/fchem.2024.1350433. eCollection 2024.

Abstract

Introduction: The increasing global pressure to explore alternative protein sources derived from animal by-products has opened-up opportunities, but it has also created the need to assess their compliance with labelling statements, to ensure consumer's trust in the composition of both feed and food products. Assessing the authenticity of highly processed animal by-products, particularly within the rapidly expanding Halal food market, presents a significant challenge due to the lack of robust and standardized methodologies. However, the success of DNA based authenticity system is highly dependent on the extracted DNA quantity, quality, and purity ratios from heterogeneous matrices. Material and methods: In this work, nine DNA extraction methods were tested on selected processed animal by-products with high-value and interest for the feed industry: meals from poultry meat, blood and feather, and hydrolysates from swine meat and bone, fish, and black soldier fly. The proposed DNA extraction methods are developed to specifically target swine-specific mitochondrial region, as a case study. Results and discussion: Both the conventional CTAB method and the commercial kits, specifically Invisorb® Spin Tissue Mini and NucleoSpin™ Food, demonstrated superior extraction efficiency and quality ratios. Nevertheless, commercial kits enabled faster detection in comparison to the conventional methods. The absence of swine DNA was successfully validated and confirmed in all animal meals and hydrolysates that did not contain swine in their composition beforehand, demonstrating their compliance with the Halal market requirements.

Keywords: DNA extraction; PCR; animal feed ingredients; authenticity; processed by-products; swine.

Grants and funding

The author(s) declare financial support was received for the research, authorship, and/or publication of this article. This work was funded by Innovation Pact, Project No. C644915664-00000026, known as the “Blue Bioeconomy Pact”, resulting from the submission of the application to Notice No. 02/C05-i01/2022, within the scope of the Recovery and Resilience Plan (PRR), at the Research Unit-Interdisciplinary Research Center Marine and Environmental, for the exercise of activities in the WP6 FEED. This work was also supported by national funds provided by FCT–Foundation for Science and Technology in the framework of the Programme Portugal 2020 to CIIMAR (UIDB/Multi/04423/2021 and UIDB/Multi/04423/2022), and through the grant awarded to Relebo M (BYT-CIIMAR Program) funded by Soja de Portugal.