Design, synthesis, and biological evaluation of some new 2-phenyl-3,6-pyridazinedione derivatives as PDE-5 inhibitors

Bioorg Chem. 2024 Apr:145:107213. doi: 10.1016/j.bioorg.2024.107213. Epub 2024 Feb 16.

Abstract

Various 2-phenyl-3,6-pyridazinedione derivatives 4a-j, 5a-c, 6a,b, 7a-c, 8, 9, 10a-d, and 11a-d, were effectivelysynthesized, and tested for their potential inhibition of phosphodiesterase enzyme at 10 µM. Then fourteen compounds exhibiting the highest inhibition 4b, 4d, 4e, 4g, 4h, 4i, 5a, 6a,b, 7c, 10a,b, 11a, and 11d were selected for screening their PDE-5 inhibition, where compounds 4b,g,h, and 11a revealed promising PDE-5 inhibition having IC50 values = 25, 53, 22, and 42 nM, respectively in comparison with Sildenafil (IC50 = 16 nM). Additionally, these four most active compounds were safe to normal fibroblast cell line WI-38. Moreover, 4f, 4h, 4j, 10d, and 11d had almost the same anti-proliferative effect against the aortic cell line as Sildenafil. Furthermore, molecular docking illustrated that the binding of the target compounds with the key amino acids in the binding site of PDE-5 (PDB 2H42) was like to that of the cocrystallized ligand Sildenafil. Additionally, molecular dynamics simulation for the most active compound 4h revealed high stability of the 4h -PDE5 complex explaining its promising activity as a PDE-5 inhibitor. Therefore, the 2-phenyl-3,6-pyridazinedione scaffold can be considered an important core for designing more promising PDE-5 inhibitors.

Keywords: Molecular docking; Molecular dynamics simulation; Phosphodiesterase 5; Pyridazinedione.

MeSH terms

  • Antineoplastic Agents* / pharmacology
  • Binding Sites
  • Molecular Docking Simulation
  • Molecular Dynamics Simulation
  • Molecular Structure
  • Phosphodiesterase 5 Inhibitors* / pharmacology
  • Sildenafil Citrate / pharmacology
  • Structure-Activity Relationship

Substances

  • Phosphodiesterase 5 Inhibitors
  • Sildenafil Citrate
  • Antineoplastic Agents