pH-dependent and whole-cell catalytic decolorization of dyes using recombinant dye-decolorizing peroxidase from Rhodococcus jostii

Bioprocess Biosyst Eng. 2024 Mar;47(3):355-366. doi: 10.1007/s00449-024-02968-8. Epub 2024 Feb 7.

Abstract

Dyes in wastewater have adverse effects on the environment and human health. Dye-decolorizing peroxidase (DyP) is a promising biocatalyst to dyes degradation, but the decolorization rates varied greatly which influencing factors and mechanisms remain to be fully disclosed. To explore an effective decolorizing approach, we have studied a DyP from Rhodococcus jostii (RhDyPB) which was overexpressed in Escherichia coli to decolorize four kinds of dyes, Reactive blue 19, Eosin Y, Indigo carmine, and Malachite green. We found the decolorization rates of the dyes by purified RhDyPB were all pH-dependent and the highest one was 94.4% of Malachite green at pH 6.0. ESI-MS analysis of intermediates in the decolorization process of Reactive blue 19 proved the degradation was due to peroxidase catalysis. Molecular docking predicated the interaction of RhDyPB with dyes, and a radical transfer reaction. In addition, we performed decolorization of dyes with whole E. coli cell with and without expressing RhDyPB. It was found that decolorization of dyes by E. coli cell was due to both cell absorption and degradation, and RhDyPB expression improved the degradation rates towards Reactive blue 19, Indigo carmine and Malachite green. The effective decolorization of Malachite green and the successful application of whole DyP-overexpressed cells in dye decolorization is conducive to the bioremediation of dye-containing wastewaters by DyPs.

Keywords: Escherichia coli; Rhodococcus jostii; Dye-containing wastewaters; Molecular docking; Whole-cell catalysis.

MeSH terms

  • Anthraquinones*
  • Biodegradation, Environmental
  • Catalysis
  • Coloring Agents* / chemistry
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Humans
  • Hydrogen-Ion Concentration
  • Indigo Carmine
  • Molecular Docking Simulation
  • Oxidoreductases
  • Peroxidase*
  • Peroxidases / chemistry
  • Rhodococcus*
  • Rosaniline Dyes*
  • Wastewater

Substances

  • Peroxidase
  • malachite green
  • Remazol Brilliant Blue R
  • Coloring Agents
  • Indigo Carmine
  • Peroxidases
  • Oxidoreductases
  • Wastewater
  • Anthraquinones
  • Rosaniline Dyes

Supplementary concepts

  • Rhodococcus jostii