Taking Me away: the function of phosphorylation on histone lysine demethylases

Trends Biochem Sci. 2024 Mar;49(3):257-276. doi: 10.1016/j.tibs.2023.12.004. Epub 2024 Jan 16.

Abstract

Histone lysine demethylases (KDMs) regulate eukaryotic gene transcription by catalysing the removal of methyl groups from histone proteins. These enzymes are intricately regulated by the kinase signalling system in response to internal and external stimuli. Here, we review the mechanisms by which kinase-mediated phosphorylation influence human histone KDM function. These include the changing of histone KDM subcellular localisation or chromatin binding, the altering of protein half-life, changes to histone KDM complex formation that result in histone demethylation, non-histone demethylation or demethylase-independent effects, and effects on histone KDM complex dissociation. We also explore the structural context of phospho-sites on histone KDMs and evaluate how this relates to function.

Keywords: chromatin accessibility; gene regulation; intrinsically disordered regions; lysine demethylase; protein–protein interaction; subcellular localization.

Publication types

  • Review

MeSH terms

  • Demethylation
  • Histone Demethylases* / metabolism
  • Histones* / metabolism
  • Humans
  • Jumonji Domain-Containing Histone Demethylases / chemistry
  • Jumonji Domain-Containing Histone Demethylases / genetics
  • Jumonji Domain-Containing Histone Demethylases / metabolism
  • Phosphorylation

Substances

  • Histone Demethylases
  • Histones
  • Jumonji Domain-Containing Histone Demethylases