Sky-bionic polar co-ordinate navigation is an effective means of providing navigational information in the absence of a priori information. Polar co-ordinate navigation during clear daytime conditions has been studied, but there has been a lack of research of it at night due to problems with noise. Therefore, in this paper, a short-wave infrared polarimetric sensor system is designed, which is capable of acquiring atmospheric polarimetric information in low illumination environments at night, compared with traditional visible band sensors. Additionally, based on the statistics of polarization angle information, an algorithm for removing noise and starlight is proposed to solve the influence of starlight and noise on the polarization information at night. After many outdoor experiments, we found that the method can output the heading angle stably and accurately, and its standard deviation is controlled to be 0.42° in a clear night.