Proteome-wide identification of methylglyoxalated proteins in rapeseed (Brassica napus L.)

Plant Physiol Biochem. 2024 Feb:207:108319. doi: 10.1016/j.plaphy.2023.108319. Epub 2023 Dec 31.

Abstract

Methylglyoxal (MG), a highly reactive cellular metabolite, is crucial for plant growth and environmental responses. MG may function by modifying its target proteins, but little is known about MG-modified proteins in plants. Here, MG-modified proteins were pulled down by an antibody against methylglyoxalated proteins and detected using liquid chromatography-tandem mass spectrometry (LC-MS/MS) analysis. We identified 543 candidate proteins which are involved in multiple enzymatic activities and metabolic processes. A great number of candidate proteins were predicted to localize to cytoplasm, chloroplast, and nucleus, consistent with the known subcellular compartmentalization of MG. By further analyzing the raw LC-MS/MS data, we obtained 42 methylglyoxalated peptides in 35 proteins and identified 10 methylglyoxalated lysine residues in a myrosinase-binding protein (BnaC06G0061400ZS). In addition, we demonstrated that MG modifies the glycolate oxidase and β-glucosidase to enhance and inhibit the enzymatic activity, respectively. Together, our study contributes to the investigation of the MG-modified proteins and their potential roles in rapeseed.

Keywords: Abiotic stress; Brassica napus; Methylglyoxal; Post-translational modification; Proteomics.

MeSH terms

  • Brassica napus* / metabolism
  • Brassica rapa* / metabolism
  • Chromatography, Liquid
  • Plant Proteins / metabolism
  • Proteome / metabolism
  • Tandem Mass Spectrometry

Substances

  • Proteome
  • Plant Proteins