Novel Immune-Related LncRNA Pairs are Associated with Immunol Infiltration and Survival Status in Glioblastoma

Neurol India. 2023 Nov-Dec;71(6):1226-1234. doi: 10.4103/0028-3886.391381.

Abstract

Background: Immune-related lncRNA is involved in tumor initiation and progression, while its effect in glioblastoma (GBM) is still unknown.

Objective: We sought to investigate the association between immune-related lncRNA (ir-lncRNA) and GBM.

Methods: Transcriptomic and clinical data were obtained from the TCGA dataset, and we found 2008 ir-lncRNA differentially expressed between GBM and adjacent brain tissues.

Results: Appling the univariate Cox and Lasso regression model, we found 30 prognosis-related ir-lncRNA pairs to construct a Cox regression risk model to associate the outcome of GBM patients. Furthermore, with this risk model, we can identify the tumor immune infiltration status, the expression of immunosuppressive biomarkers, and chemical sensitivity in GBM patients.

Conclusions: We constructed an immunologic risk model with lncRNA to associate the survival outcome of GBM patients, which can provide useful biomarkers.

Keywords: Glioblastoma (GBM); TCGA; immune-related lncRNA; risk model.

MeSH terms

  • Biomarkers
  • Cell Transformation, Neoplastic
  • Gene Expression Regulation, Neoplastic / genetics
  • Glioblastoma* / genetics
  • Humans
  • Immunosuppressive Agents
  • Levamisole
  • Prognosis
  • RNA, Long Noncoding* / genetics

Substances

  • RNA, Long Noncoding
  • Immunosuppressive Agents
  • Levamisole
  • Biomarkers