Transcriptome profiling of type VI secretion system core gene tssM mutant of Xanthomonas perforans highlights regulators controlling diverse functions ranging from virulence to metabolism

Microbiol Spectr. 2024 Jan 11;12(1):e0285223. doi: 10.1128/spectrum.02852-23. Epub 2023 Nov 29.

Abstract

T6SS has received attention due to its significance in mediating interorganismal competition through contact-dependent release of effector molecules into prokaryotic and eukaryotic cells. Reverse-genetic studies have indicated the role of T6SS in virulence in a variety of plant pathogenic bacteria, including the one studied here, Xanthomonas. However, it is not clear whether such effect on virulence is merely due to a shift in the microbiome-mediated protection or if T6SS is involved in a complex virulence regulatory network. In this study, we conducted in vitro transcriptome profiling in minimal medium to decipher the signaling pathways regulated by tssM-i3* in X. perforans AL65. We show that TssM-i3* regulates the expression of a suite of genes associated with virulence and metabolism either directly or indirectly by altering the transcription of several regulators. These findings further expand our knowledge on the intricate molecular circuits regulated by T6SS in phytopathogenic bacteria.

Keywords: T3SS; T6SS; biofilms; plant-pathogen interactions; secretion system; transcriptome sequencing.

MeSH terms

  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Gene Expression Profiling
  • Type VI Secretion Systems* / genetics
  • Virulence / genetics
  • Xanthomonas* / genetics
  • Xanthomonas* / metabolism

Substances

  • Type VI Secretion Systems
  • Bacterial Proteins

Supplementary concepts

  • Xanthomonas perforans