mResU-Net: multi-scale residual U-Net-based brain tumor segmentation from multimodal MRI

Med Biol Eng Comput. 2024 Mar;62(3):641-651. doi: 10.1007/s11517-023-02965-1. Epub 2023 Nov 19.

Abstract

Brain tumor segmentation is an important direction in medical image processing, and its main goal is to accurately mark the tumor part in brain MRI. This study proposes a brand new end-to-end model for brain tumor segmentation, which is a multi-scale deep residual convolutional neural network called mResU-Net. The semantic gap between the encoder and decoder is bridged by using skip connections in the U-Net structure. The residual structure is used to alleviate the vanishing gradient problem during training and ensure sufficient information in deep networks. On this basis, multi-scale convolution kernels are used to improve the segmentation accuracy of targets of different sizes. At the same time, we also integrate channel attention modules into the network to improve its accuracy. The proposed model has an average dice score of 0.9289, 0.9277, and 0.8965 for tumor core (TC), whole tumor (WT), and enhanced tumor (ET) on the BraTS 2021 dataset, respectively. Comparing the segmentation results of this method with existing techniques shows that mResU-Net can significantly improve the segmentation performance of brain tumor subregions.

Keywords: BraTS; Brain tumor segmentation; Multi-scale Residual U-Net; Multimodal MRI.

Publication types

  • Review

MeSH terms

  • Algorithms
  • Brain
  • Brain Neoplasms* / diagnostic imaging
  • Humans
  • Image Processing, Computer-Assisted
  • Magnetic Resonance Imaging
  • Neuroimaging