Utilizing databases for astrocyte secretome research

Expert Rev Proteomics. 2023 Jul-Dec;20(12):371-379. doi: 10.1080/14789450.2023.2285311. Epub 2023 Dec 30.

Abstract

Introduction: Astrocytes are the most abundant cell type in the central nervous system (CNS). They play a pivotal role in supporting neuronal function and maintaining homeostasis by releasing a variety of bioactive proteins, collectively known as the astrocyte secretome. Investigating secretome provides insights into the molecular mechanisms underlying astrocyte function and dysfunction, as well as novel strategies to prevent and treat diseases affecting the CNS.

Areas covered: Proteomics databases are a valuable resource for studying the role of astrocytes in healthy and diseased brain function, as they provide information about gene expression, protein expression, and cellular function. In this review, we discuss existing databases that are useful for astrocyte secretome research.

Expert opinion: Astrocyte secretomics is a field that is rapidly progressing, yet the availability of dedicated databases is currently limited. To meet the increasing demand for comprehensive omics data in glia research, developing databases specifically focused on astrocyte secretome is crucial. Such databases would allow researchers to investigate the intricate molecular landscape of astrocytes and comprehend their involvement in diverse physiological and pathological processes. Expanding resources through the development of databases dedicated to the astrocyte secretome may facilitate further advancements in this field.

Keywords: Astrocyte; central nervous system; database; proteomics; secretome.

Publication types

  • Review
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Astrocytes* / metabolism
  • Humans
  • Neuroglia / metabolism
  • Neurons / metabolism
  • Proteins / metabolism
  • Secretome*

Substances

  • Proteins