Leveraging a disulfidptosis/ferroptosis-based signature to predict the prognosis of lung adenocarcinoma

Xiaoqing Ma; Zilin Deng; Zhen Li; Ting Ma; Guiqing Li; Cuijia Zhang; Wentao Zhang; Jin Chang

doi:10.1186/s12935-023-03125-z

Leveraging a disulfidptosis/ferroptosis-based signature to predict the prognosis of lung adenocarcinoma

Cancer Cell Int. 2023 Nov 9;23(1):267. doi: 10.1186/s12935-023-03125-z.

Authors

Xiaoqing Ma^{1

2}, Zilin Deng^{1

2}, Zhen Li^{1

2}, Ting Ma^{1

2}, Guiqing Li^{1

2}, Cuijia Zhang^{1

2}, Wentao Zhang^{3

4}, Jin Chang^{5

6}

Affiliations

¹ Department of Radiation Oncology, The Second Affiliated Hospital of Shandong First Medical University, Taian, Shandong, China.
² Shandong First Medical University, Jinan, Shandong, China.
³ Department of Radiation Oncology, The Second Affiliated Hospital of Shandong First Medical University, Taian, Shandong, China. wentaozhang9683@gmail.com.
⁴ Shandong First Medical University, Jinan, Shandong, China. wentaozhang9683@gmail.com.
⁵ Department of Radiation Oncology, The Second Affiliated Hospital of Shandong First Medical University, Taian, Shandong, China. jchang@sdfmu.edu.cn.
⁶ Shandong First Medical University, Jinan, Shandong, China. jchang@sdfmu.edu.cn.

Abstract

Background: Disulfidptosis and Ferroptosis are two novel forms of cell death. Although their mechanisms differ, research has shown that there is a relationship between the two. Investigating the connection between these two forms of cell death can further deepen our understanding of the development and progression of cancer, and provide better prediction models for accurate prognosis.

Methods: In this study, RNA sequencing (RNA-seq) data, clinical data, single nucleotide polymorphism (SNP) data, and single-cell sequencing data were obtained from public databases. We used weighted gene co-expression network analysis (WGCNA) and unsupervised clustering to identify new Disulfidptosis/Ferroptosis-Related Genes (DFRG), and constructed a LASSO COX prognosis model that was externally validated. To further explore this novel signature, pathway and function analysis was performed, and differences in gene mutation frequency between high- and low-risk groups were studied. Importantly, we also conducted research on immune checkpoint, immune cell infiltration levels and immune resistance indicators, in addition to analyzing real clinical immunotherapy data.

Results: We have identified four optimal disulfidptosis/ferroptosis-related genes (ODFRGs) that are differentially expressed and associated with the prognosis of Lung Adenocarcinoma (LUAD). These genes include GMPR, MCFD2, MRPL13, and SALL2. Based on these ODFRGs, we constructed a robust prognostic model in this study, and the high-risk group showed significantly lower overall survival (OS) compared to the low-risk group. Furthermore, this model can also predict the immunotherapy outcomes of LUAD patients to some extent.

Keywords: Disulfidptosis; Ferroptosis; LUAD; Prognosis; Signature.