GMP Synthetase: Allostery, Structure, and Function

Biomolecules. 2023 Sep 12;13(9):1379. doi: 10.3390/biom13091379.

Abstract

Glutamine amidotransferases (GATs) catalyze the hydrolysis of glutamine and transfer the generated ammonia to diverse metabolites. The two catalytic activities, glutaminolysis and the subsequent amination of the acceptor substrate, happen in two distinct catalytic pockets connected by a channel that facilitates the movement of ammonia. The de novo pathway for the synthesis of guanosine monophosphate (GMP) from xanthosine monophosphate (XMP) is enabled by the GAT GMP synthetase (GMPS). In most available crystal structures of GATs, the ammonia channel is evident in their native state or upon ligand binding, providing molecular details of the conduit. In addition, conformational changes that enable the coordination of the two catalytic chemistries are also informed by the available structures. In contrast, despite the first structure of a GMPS being published in 1996, the understanding of catalysis in the acceptor domain and inter-domain crosstalk became possible only after the structure of a glutamine-bound mutant of Plasmodium falciparum GMPS was determined. In this review, we present the current status of our understanding of the molecular basis of catalysis in GMPS, becoming the first comprehensive assessment of the biochemical function of this intriguing enzyme.

Keywords: ATP pyrophosphatase; GMP synthetase; allostery; ammonia channeling; crystal structure; drug target; glutaminase; glutamine amidotransferase; succinimide.

Publication types

  • Review

Grants and funding

This research was funded by the CNRS, the ANR project grant “PLASMOPUR” ANR-17-CE11-0032 and the Fondation Innovation en Infectiologie, “FINOVI project AO12-27”. HB is a JC Bose National Fellow and acknowledges funding from the Department of Biotechnology, and Science and Engineering Research Board, Government of India.