Allele-specific expression reveals genetic drivers of tissue regeneration in mice

Cell Stem Cell. 2023 Oct 5;30(10):1368-1381.e6. doi: 10.1016/j.stem.2023.08.010. Epub 2023 Sep 14.

Abstract

In adult mammals, skin wounds typically heal by scarring rather than through regeneration. In contrast, "super-healer" Murphy Roths Large (MRL) mice have the unusual ability to regenerate ear punch wounds; however, the molecular basis for this regeneration remains elusive. Here, in hybrid crosses between MRL and non-regenerating mice, we used allele-specific gene expression to identify cis-regulatory variation associated with ear regeneration. Analyzing three major cell populations (immune, fibroblast, and endothelial), we found that genes with cis-regulatory differences specifically in fibroblasts were associated with wound-healing pathways and also co-localized with quantitative trait loci for ear wound-healing. Ectopic treatment with one of these proteins, complement factor H (CFH), accelerated wound repair and induced regeneration in typically fibrotic wounds. Through single-cell RNA sequencing (RNA-seq), we observed that CFH treatment dramatically reduced immune cell recruitment to wounds, suggesting a potential mechanism for CFH's effect. Overall, our results provide insights into the molecular drivers of regeneration with potential clinical implications.

Keywords: fibroblasts; fibrosis; gene expression analysis; genetics; genomics; regeneration; wound healing.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, N.I.H., Extramural

MeSH terms

  • Alleles
  • Animals
  • Cicatrix / pathology
  • Ear* / injuries
  • Ear* / pathology
  • Mammals
  • Mice
  • Mice, Inbred Strains
  • Wound Healing* / genetics