Exploring Genetic Information with Ease: The Linkout Plugin for JBrowse 2

MicroPubl Biol. 2023 Aug 19:2023:10.17912/micropub.biology.000906. doi: 10.17912/micropub.biology.000906. eCollection 2023.

Abstract

JBrowse 2 is a next-generation genome browser that can be run as a web or desktop application. We describe a new plugin, the Linkout Plugin, that enables users to link features to external databases based on their IDs and the remote URLs on JBrowse 2 desktop or web. As a result, genome analysis time and effort are reduced, enabling researchers to gain insights more quickly. The Linkout Plugin fills a common need scientists have: looking for more information on a gene. Overall, the Linkout Plugin is a valuable and practical addition to the JBrowse functionality.

Grants and funding

This work was funded by non-assistance cooperative agreement #58-8260-8-002 between the USDA-ARS National Agricultural Library and the National Taiwan University.