eIF3i promotes colorectal cancer cell survival via augmenting PHGDH translation

J Biol Chem. 2023 Sep;299(9):105177. doi: 10.1016/j.jbc.2023.105177. Epub 2023 Aug 21.

Abstract

Translational regulation is one of the decisive steps in gene expression, and its dysregulation is closely related to tumorigenesis. Eukaryotic translation initiation factor 3 subunit i (eIF3i) promotes tumor growth by selectively regulating gene translation, but the underlying mechanisms are largely unknown. Here, we show that eIF3i is significantly increased in colorectal cancer (CRC) and reinforces the proliferation of CRC cells. Using ribosome profiling and proteomics analysis, several genes regulated by eIF3i at the translation level were identified, including D-3-phosphoglycerate dehydrogenase (PHGDH), a rate-limiting enzyme in the de novo serine synthesis pathway that participates in metabolic reprogramming of tumor cells. PHGDH knockdown significantly represses CRC cell proliferation and partially attenuates the excessive growth induced by eIF3i overexpression. Mechanistically, METTL3-mediated N6-methyladenosine modification on PHGDH mRNA promotes its binding with eIF3i, ultimately leading to a higher translational rate. In addition, knocking down eIF3i and PHGDH impedes tumor growth in vivo. Collectively, this study not only uncovered a novel regulatory mechanism for PHGDH translation but also demonstrated that eIF3i is a critical metabolic regulator in human cancer.

Keywords: METTL3; PHGDH; colorectal cancer; eIF3i; translational regulation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Line, Tumor
  • Cell Proliferation / genetics
  • Cell Survival / genetics
  • Colorectal Neoplasms* / genetics
  • Colorectal Neoplasms* / physiopathology
  • Eukaryotic Initiation Factor-3* / genetics
  • Eukaryotic Initiation Factor-3* / metabolism
  • Female
  • Gene Expression Regulation, Neoplastic* / genetics
  • Gene Knockdown Techniques
  • Heterografts
  • Humans
  • Methyltransferases / metabolism
  • Mice
  • Mice, Inbred BALB C
  • Phosphoglycerate Dehydrogenase* / genetics
  • Phosphoglycerate Dehydrogenase* / metabolism
  • RNA, Messenger / metabolism
  • Up-Regulation

Substances

  • Methyltransferases
  • METTL3 protein, human
  • Phosphoglycerate Dehydrogenase
  • RNA, Messenger
  • EIF3I protein, human
  • Eukaryotic Initiation Factor-3
  • N(6)-methoxyadenine