Emergence of novel tigecycline resistance gene tet(X5) variant in multidrug-resistant Acinetobacter indicus of swine farming environments

Vet Microbiol. 2023 Sep:284:109837. doi: 10.1016/j.vetmic.2023.109837. Epub 2023 Jul 27.

Abstract

Antibiotic-resistant bacteria are emerging all the time, but the continued emergence of novel resistance genes and genetic structures is even more alarming. Tigecycline is currently the important last barrier in the treatment of multidrug-resistant (MDR) infections. tet(X), a resistance gene to tigecycline, is the most prevalent and constantly emerging novel variants. In this research, we characterized two MDR Acinetobacter indicus strains to tigecycline that were identified and analyzed by antimicrobial susceptibility testing, conjugation transfer, whole genome sequencing (WGS) and bioinformatics analysis, and gene function analysis. The results showed that three tet(X) variants were carried in BDT201, including tet(X6) on the chromosome, tet(X3) on the plasmid pBDT201-2, and a novel tet(X5) variant adjacent to the ISAba1 elements on the plasmid pBDT201-3. The novel Tet(X5) variant showed 98.7% amino acid identity with Tet(X5) and was named Tet(X5.4). By expressing tet(X5.4) gene, the tigecycline minimum inhibitory concentration (MIC) values for Escherichia coli JM109 increased 32- fold (from 0.13 to 4 mg/L). BDT2076 contained tigecycline and carbapenems resistance genes, such as tet(X3), blaOXA-58, blaNDM-3, and blaCARB-2. The continuous emergence of MDR bacteria and resistance genes is a global environmental health issue that can not be ignored and therefore needs to pay more urgent attention to it.

Keywords: Acinetobacter indicus; Resistance; Tigecycline; tet(X); tet(X5) variant.

MeSH terms

  • Acinetobacter* / genetics
  • Animals
  • Anti-Bacterial Agents* / pharmacology
  • Escherichia coli / genetics
  • Farms
  • Microbial Sensitivity Tests / veterinary
  • Plasmids / genetics
  • Swine
  • Tigecycline / pharmacology

Substances

  • Tigecycline
  • Anti-Bacterial Agents

Supplementary concepts

  • Acinetobacter indicus