Enhancing the thermostability of Streptomyces cyaneofuscatus strain Ms1 tyrosinase by multi-factors rational design and molecular dynamics simulations

PLoS One. 2023 Jul 20;18(7):e0288929. doi: 10.1371/journal.pone.0288929. eCollection 2023.

Abstract

This study presents a multi-factor rational design strategy combined with molecular dynamics simulation to improve the thermostability of Streptomyces cyaneofuscatus strain Ms1 tyrosinase. Candidate mutation sites were identified using Discovery Studio and FoldX software, and the double mutant G124W/G137W was obtained. The mutant was heterogeneously expressed in Escherichia coli strain Rosetta2 (DE3), and its thermostability was verified. Results indicate that the rational design method, combined with molecular dynamics simulation and protein energy calculation, improved the enzyme's thermostability more accurately and effectively. The double mutant G124W/G137W had an optimum temperature of 60°C, about 5.0°C higher than that of the wild-type TYRwt, and its activity was 171.06% higher than the wild-type TYRwt. Its thermostability was enhanced, 42.78% higher than the wild-type at 50°C. These findings suggest that the rational design strategy applied in this study can facilitate the application of industrial enzymes in the pharmaceutical industry.

MeSH terms

  • Enzyme Stability
  • Escherichia coli / genetics
  • Kinetics
  • Molecular Dynamics Simulation*
  • Monophenol Monooxygenase* / genetics
  • Protein Engineering / methods
  • Temperature

Substances

  • Monophenol Monooxygenase

Supplementary concepts

  • Streptomyces cyaneofuscatus

Grants and funding

This study was funded by grant 2017HH0011 of Science and Technology Department of Sichuan Province Project, grant 2016-XT00-00023-GX of Science and Technology Bureau, Chengdu Municipal Government Project, and grant MMLKF14-01 of State Key Laboratory project of Microbial Metabolism, School of Life Sciences & Biotechnology, Shanghai Jiao Tong University. The funders only provide financial support and do not play a role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.