DNA barcoding data release for the Phoridae (Insecta, Diptera) of the Halimun-Salak National Park (Java, Indonesia)

Biodivers Data J. 2023 Jul 4:11:e104942. doi: 10.3897/BDJ.11.e104942. eCollection 2023.

Abstract

Launched in 2015, the large-scale initiative Indonesian Biodiversity Discovery and Information System (IndoBioSys) is a multidisciplinary German-Indonesian collaboration with the main goal of establishing a standardised framework for species discovery and all associated steps. One aspect of the project includes the application of DNA barcoding for species identification and biodiversity assessments. In this framework, we conducted a large-scale assessment of the insect fauna of the Mount Halimun-Salak National Park which is one of the largest tropical rain-forest ecosystems left in West Java. In this study, we present the results of processing 5,034 specimens of Phoridae (scuttle flies) via DNA barcoding. Despite limited sequencing success, we obtained more than 500 clusters using different algorithms (RESL, ASAP, SpeciesIdentifier). Moreover, Chao statistics indicated that we drastically undersampled all trap sites, implying that the true diversity of Phoridae is, in fact, much higher. With this data release, we hope to shed some light on the hidden diversity of this megadiverse group of flies.

Keywords: Brachycera; DNA barcoding; Indonesia; Malaise trap; Phoridae; biodiversity; tropical forest.

Associated data

  • figshare/10.6084/m9.figshare.21806370

Grants and funding

The IndoBioSys project was funded by the German Federal Ministry of Education and Research (BMBF). The Indonesian counterpart institutions were funded by DIPA PUSLIT Biologi LIPI 2015-2016.