Construction and validation of an NAD + metabolism-related lncRNA signature for predicting the prognosis and immune landscape of acute myeloid leukemia

Hematology. 2023 Dec;28(1):2231760. doi: 10.1080/16078454.2023.2231760.

Abstract

Background: This study aimed to investigate the potential of a NAD+ metabolism-related lncRNA signature as a reliable prognostic biomarker for acute myeloid leukemia (AML).

Methods: Transcriptome profiles and clinical data of AML patients were obtained from The Cancer Genome Atlas (TCGA) database. NAD+ metabolism-related genes (NMRGs) were identified from the KEGG and Reactome databases. Coexpression analysis was used to screen NAD+ metabolism-related lncRNAs. The NAD+ metabolismrelated lncRNA signature was constructed using univariate analysis, LASSO regression, and multivariate analysis. High- and low-risk groups were compared for survival, tumor mutation burden, immune cell infiltration, and response to immunotherapy. Enrichment analysis explored the biological functions.

Results: LINC01679, AC079922.2, TRAF3IP2-AS1, and LINC02465 were identified to construct the risk model. The model exhibited good predictive power and outperformed age and gender as an independent prognostic marker. High-risk patients showed poorer survival, distinct TP53 mutations, and altered immune cell infiltration compared to low-risk patients. Additionally, low-risk patients exhibited greater sensitivity to immunotherapy. Enriched biological functions included leukocyte migration and positive regulation of cytokine production.

Conclusions: The NAD+ metabolism-related lncRNA signature shows promise in predicting clinical outcomes for AML patients.

Keywords: Acute myeloid leukemia1; NAD+ metabolism2; immune landscape4; lncRNA5; prognostic signature3.

MeSH terms

  • Cell Movement
  • Humans
  • Leukemia, Myeloid, Acute* / genetics
  • NAD
  • Prognosis
  • RNA, Long Noncoding* / genetics

Substances

  • RNA, Long Noncoding
  • NAD