Harnessing a paper-folding mechanism for reconfigurable DNA origami

Nature. 2023 Jul;619(7968):78-86. doi: 10.1038/s41586-023-06181-7. Epub 2023 Jul 5.

Abstract

The paper-folding mechanism has been widely adopted in building of reconfigurable macroscale systems because of its unique capabilities and advantages in programming variable shapes and stiffness into a structure1-5. However, it has barely been exploited in the construction of molecular-level systems owing to the lack of a suitable design principle, even though various dynamic structures based on DNA self-assembly6-9 have been developed10-23. Here we propose a method to harness the paper-folding mechanism to create reconfigurable DNA origami structures. The main idea is to build a reference, planar wireframe structure24 whose edges follow a crease pattern in paper folding so that it can be folded into various target shapes. We realized several paper-like folding and unfolding patterns using DNA strand displacement25 with high yield. Orthogonal folding, repeatable folding and unfolding, folding-based microRNA detection and fluorescence signal control were demonstrated. Stimuli-responsive folding and unfolding triggered by pH or light-source change were also possible. Moreover, by employing hierarchical assembly26 we could expand the design space and complexity of the paper-folding mechanism in a highly programmable manner. Because of its high programmability and scalability, we expect that the proposed paper-folding-based reconfiguration method will advance the development of complex molecular systems.

MeSH terms

  • DNA* / chemistry
  • Fluorescence
  • Hydrogen-Ion Concentration
  • MicroRNAs / analysis
  • MicroRNAs / chemistry
  • Nucleic Acid Conformation*

Substances

  • DNA
  • MicroRNAs