Identification cloning and functional analysis of novel natural antisense lncRNA CFL1-AS1 in cattle

Epigenetics. 2023 Dec;18(1):2231707. doi: 10.1080/15592294.2023.2231707.

Abstract

Long noncoding RNAs have been identified as important regulators of gene expression and animal development. The expression of natural antisense transcripts (NATs) transcribed in the opposite direction to protein-coding genes is usually positively correlated with the expression of homologous sense genes and is the key factor for expression. Here, we identified a conserved noncoding antisense transcript, CFL1-AS1, that plays an important role in muscle growth and development. CFL1-AS1 overexpression and knockout vectors were constructed and transfected into 293T and C2C12 cells. CFL1-AS1 positively regulated CFL1 gene expression, and the expression of CFL2 was also downregulated when CFL1-AS1 was knocked down. CFL1-AS1 promoted cell proliferation, inhibited apoptosis and participated in autophagy. This study expands the research on NATs in cattle and lays a foundation for the study of the biological function of bovine CFL1 and its natural antisense chain transcript CFL1-AS1 in bovine skeletal muscle development. The discovery of this NAT can provide a reference for subsequent genetic breeding and data on the characteristics and functional mechanisms of NATs.

Keywords: CFL1-AS1; NATs; cloning; expression vector.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Apoptosis / genetics
  • Cattle / genetics
  • Cell Line, Tumor
  • Cell Proliferation / genetics
  • Cloning, Molecular
  • DNA Methylation
  • Gene Expression Regulation, Neoplastic
  • MicroRNAs* / metabolism
  • RNA, Antisense / genetics
  • RNA, Antisense / metabolism
  • RNA, Long Noncoding* / genetics
  • RNA, Long Noncoding* / metabolism

Substances

  • RNA, Long Noncoding
  • RNA, Antisense
  • MicroRNAs

Grants and funding

This work was supported by the National Natural Science Foundation of China (No. 31902147).