AraENCODE: A comprehensive epigenomic database of Arabidopsis thaliana

Mol Plant. 2023 Jul 3;16(7):1113-1116. doi: 10.1016/j.molp.2023.06.005. Epub 2023 Jun 26.

Abstract

Arabidopsis is an important model organism in plant biology and genetics, and a large number of a chromatin conformation and epigenomic datasets have been generated to study the biology in Arabidopsis. To make it easier to access the accumulated epigenomic data, a user-friendly and reproducible epigenomic database, AraENCODE was developed. It contains various datasets and resources, including chromatin conformation, epigenomic, and transcriptome data, allowing researchers to investigate the regulation of epigenetic and chromatin interactions in Arabidopsis.

Publication types

  • Letter
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis* / genetics
  • Chromatin / genetics
  • Databases, Factual
  • Epigenomics
  • Transcriptome

Substances

  • Chromatin