The effects of biliverdin on pressure-induced unfolding of apomyoglobin: The specific role of Zn2+ ions

Int J Biol Macromol. 2023 Aug 1:245:125549. doi: 10.1016/j.ijbiomac.2023.125549. Epub 2023 Jun 23.

Abstract

Apomyoglobin (apoMb), a model protein in biochemistry, exhibits a strong propensity to bind various ligands, which makes it a good candidate as a carrier of bioactive hydrophobic drugs. The stability of its hydrophobic pocket determines its potential as a carrier of bioactive compounds. High pressure (HP) is a potent tool for studying protein stability, revealing the specific role of hydrophobic cavities in unfolding. We probed the effects of biliverdin (BV) binding and its complex with Zn2+ ions on the structure and HP stability of apoMb. CD spectroscopy and SAXS measurements revealed that BV and BV-Zn2+ complexes make the apoMb structure more compact with higher α-helical content. We performed in situ HP measurements of apoMb intrinsic fluorescence to demonstrate the ability of BV to stabilise apoMb structure at HP conditions. Furthermore, the presence of Zn2+ within the apoMb-BV complex significantly enhances the BV stabilisation effect. In situ visible absorption study of BV chromophore confirmed the ability of Zn2+ to increase the stability of apoMb-BV complex under HP: the onset of complex dissociation is shifted by ∼100 MPa in presence of Zn2+. By combining HP-fluorescence and HP-visible absorption spectroscopy, our strategy highlights the crucial role of tetrapyrrole-metal complexes in stabilising apoMb hydrophobic pocket.

Keywords: Apomyoglobin; Biliverdin; Binding; High-pressure; Stability; Zinc.

MeSH terms

  • Apoproteins / chemistry
  • Biliverdine* / pharmacology
  • Ions
  • Myoglobin* / chemistry
  • Scattering, Small Angle
  • X-Ray Diffraction
  • Zinc / pharmacology

Substances

  • apomyoglobin
  • Biliverdine
  • Myoglobin
  • Apoproteins
  • Ions
  • Zinc