Proximity Extension Assay (PEA) Platform to Detect Vitreous Biomarkers of Diabetic Retinopathy

Methods Mol Biol. 2023:2678:135-145. doi: 10.1007/978-1-0716-3255-0_9.

Abstract

Diabetic retinopathy (DR) is one of the leading causes of blindness, affecting more than 100 million people worldwide. Currently, DR prognosis and management are based mainly on biomarkers identified by direct retinal fundus observation or by imaging devices. The use of molecular biology to discover biomarkers of DR has great potential to impact the standard of care, and the vitreous humor can serve as an indirect source for those molecular biomarkers because it is rich in proteins secreted by the retina. Proximity extension assay (PEA) is a technology that combines antibody-based immunoassays with DNA-coupled methodology to obtain information on the abundance of multiple proteins while using minimal sample volume, with high specificity and sensitivity. Matched antibodies labelled with a complementary sequence of oligonucleotides are used to simultaneously bind a target protein in solution, and when in proximity, the complementary sequences on each antibody hybridize, serving as template for DNA polymerase-dependent extension and the generation of a unique double-stranded DNA "barcode." PEA works well with vitreous matrix and has great potential to support the identification of novel predictive and prognostic biomarkers of DR.

Keywords: Diabetes; Diabetic retinopathy; Drug discovery; Liquid biopsy; Molecular diagnosis; Multiplex assay; Vitreous biomarkers; Vitreous proteomics.

MeSH terms

  • Biomarkers / metabolism
  • Diabetes Mellitus* / metabolism
  • Diabetic Retinopathy* / diagnosis
  • Diabetic Retinopathy* / metabolism
  • Humans
  • Pisum sativum / metabolism
  • Retina / metabolism
  • Vitreous Body / metabolism

Substances

  • Biomarkers