Metabarcoding of Antarctic Lichens from Areas with Different Deglaciation Times Reveals a High Diversity of Lichen-Associated Communities

Genes (Basel). 2023 Apr 29;14(5):1019. doi: 10.3390/genes14051019.

Abstract

Lichens have developed numerous adaptations to optimise their survival under harsh abiotic stress, colonise different substrates, and reach substantial population sizes and high coverage in ice-free Antarctic areas, benefiting from a symbiotic lifestyle. As lichen thalli represent consortia with an unknown number of participants, it is important to know about the accessory organisms and their relationships with various environmental conditions. To this end, we analysed lichen-associated communities from Himantormia lugubris, Placopsis antarctica, P. contortuplicata, and Ramalina terebrata, collected from soils with differing deglaciation times, using a metabarcoding approach. In general, many more Ascomycete taxa are associated with the investigated lichens compared to Basidiomycota. Given our sampling, a consistently higher number of lichen-associated eukaryotes are estimated to be present in areas with deglaciation times of longer than 5000 years compared to more recently deglaciated areas. Thus far, members of Dothideomycetes, Leotiomycetes, and Arthoniomycetes have been restricted to the Placopsis specimens from areas with deglaciation times longer than 5000 years. Striking differences between the associated organisms of R. terebrata and H. lugubris have also been discovered. Thus, a species-specific basidiomycete, Tremella, was revealed for R. terebrata, as was a member of Capnodiales for H. lugubris. Our study provides further understanding of the complex terricolous lichen-associated mycobiome using the metabarcoding approach. It also illustrates the necessity to extend our knowledge of complex lichen symbiosis and further improve the coverage of microbial eukaryotes in DNA barcode libraries, including more extended sampling.

Keywords: Himantormia; Placopsis; Ramalina; deglaciation time; lichen-associated eukaryotes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antarctic Regions
  • Basidiomycota*
  • Humans
  • Lichens* / genetics

Grants and funding

The molecular part of this work was supported by the Staatliche Naturwissenschaftliche Sammlungen Bayerns (SNSBinnovativ to AB). Logistic support was provided by the National Fund for Scientific and Technological Development (ANID-FONDECYT 1118745 to AC-K) and the Instituto Antártico Chileno (INACH RT-2716 to AC-K). Financial support was also provided by the DFG to AB for attending the SPP 1158 Topic Workshop “Polar Genomics”, held from the 16 to 18 May 2022 in Bielefeld, Germany, under the DFG Priority Program 1158, “Antarctic Research with Comparative Investigations in Arctic Ice Areas”.