Multi-centric evaluation of Biomeme Franklin Mobile qPCR for rapid detection of Mycobacterium ulcerans in clinical specimens

PLoS Negl Trop Dis. 2023 May 25;17(5):e0011373. doi: 10.1371/journal.pntd.0011373. eCollection 2023 May.

Abstract

The gold standard for detection of Mycobacterium ulcerans is PCR due to its high accuracy in confirmation of suspected cases. But the available PCR assays are designed for standard size thermocyclers which are immobile and suited for reference laboratories often located long distances from endemic communities. This makes it a challenge to obtain immediate results for patient management. We validated and evaluated a dried reagent-based PCR assay adapted for a handheld, battery-operated, portable thermocycler with the potential to extend diagnostics to endemic communities with limited infrastructure. The diagnostic accuracy of the assay following a multi-center evaluation by three Buruli ulcer reference laboratories with over 300 clinical samples showed sensitivity and specificity of 100-97% and 100-94%, respectively using centralized IS2404 quantitative PCR platform as a reference standard. This assay coupled with a field-friendly extraction method fulfill almost all the target product profiles of Buruli ulcer for decentralized testing at the district, health center and community levels; a key critical action for achieving the NTD Road Map 2030 target for Buruli ulcer.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Buruli Ulcer* / microbiology
  • Humans
  • Mycobacterium ulcerans* / genetics
  • Nucleic Acid Amplification Techniques / methods
  • Polymerase Chain Reaction / methods
  • Sensitivity and Specificity

Grants and funding

American Leprosy Missions funded the study with Grant (USA/380) at KCCR that was held by MF. SCV was funded by the American Leprosy Missions grant (RCAM/232) at the University of Cambridge for structure Guided Drug Discovery in Leprosy. The funders had no role in study design, data collection and analysis, decision to publish or preparation of the manuscript.