ProbRank: An efficient DNA database search method for complex mixtures per a quantitative likelihood ratio model

Forensic Sci Int Genet. 2023 Jul:65:102884. doi: 10.1016/j.fsigen.2023.102884. Epub 2023 May 2.

Abstract

Searching a DNA Database with a DNA profile from an evidentiary trace can provide investigative leads in a forensic case. Various searching approaches exist such as conventional methods based on matching alleles or more advanced methods computing likelihood ratios (LR) while considering drop-in and drop-out. Here we examine the potential of using a quantitative LR model (EuroForMix model incorporated in ProbRank method) that takes peak heights into account in comparison to a qualitative LR model (LRmix model implemented in SmartRank method). Both methods present DNA database candidates in order of decreasing LR. Especially regarding minor contributors in complex mixtures, the method using the quantitative model outperforms the method using the qualitative model in terms of sensitivity and specificity as more true donors and less adventitious matches are retrieved. ProbRank is to be implemented in DNAStatistX and is sufficiently fast for daily use.

Keywords: DNA database searches; DNAStatistX; Forensic science; ProbRank; Probabilistic genotyping; SmartRank.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Complex Mixtures / genetics
  • DNA Fingerprinting / methods
  • Databases, Nucleic Acid*
  • Humans
  • Likelihood Functions
  • Microsatellite Repeats
  • Software*

Substances

  • Complex Mixtures