HIF1α-mediated transactivation of WTAP promotes AML cell proliferation via m6A-dependent stabilization of KDM4B mRNA

Leukemia. 2023 Jun;37(6):1254-1267. doi: 10.1038/s41375-023-01904-1. Epub 2023 Apr 22.

Abstract

Hypoxia inducible factor 1α (HIF1α) is abnormally overexpressed in t(8;21) acute myeloid leukemia (AML) and functions as an oncogene through transactivating DNA methyltransferase 3 alpha leading to DNA hypermethylation. However, it remains unclear whether HIF1α influences RNA N6-methyladenosine (m6A) methyltransferases. Here, we show that HIF1α promotes the expression of Wilms tumor 1-associated protein (WTAP), a main component of the m6A methyltransferase complex, markedly alters the transcriptome-wide m6A distribution and enhances cell proliferation in t(8;21) AML. In agreement with this, WTAP is overexpressed and predicts poor prognosis in t(8;21) AML patients. Moreover, WTAP knockdown inhibits growth, and induces apoptosis and differentiation of leukemia cells. Mechanistically, HIF1α transactivates WTAP gene expression by directly binding to the hypoxia-response element of its promoter region. Pharmacological or genetic intervention in the HIF1α-WTAP axis results in the reduction of m6A level on lysine demethylase 4B (KDM4B) transcripts and increased its degradation, correlated with lower expression of KDM4B and higher trimethylation levels of histone H3 on lysine 9. KDM4B knockdown inhibits leukemia cell growth in vitro and in mice. Thus, HIF1α-mediated WTAP high expression enhances the malignant behavior of leukemia cells and drives a crosstalk between m6A RNA methylation and histone methylation through monitoring m6A-dependant KDM4B translation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Cycle Proteins / genetics
  • Cell Proliferation / genetics
  • DNA Methylation
  • Humans
  • Hypoxia-Inducible Factor 1, alpha Subunit / metabolism
  • Leukemia, Myeloid, Acute* / pathology
  • Mice
  • RNA Splicing Factors / genetics
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Transcriptional Activation

Substances

  • Cell Cycle Proteins
  • RNA Splicing Factors
  • RNA, Messenger
  • HIF1A protein, human
  • Hypoxia-Inducible Factor 1, alpha Subunit
  • WTAP protein, human
  • KDM4B protein, human