Genetic polymorphisms of ACE1, ACE2, IFTM3, TMPRSS2 and TNFα genes associated with susceptibility and severity of SARS-CoV-2 infection: a systematic review and meta-analysis

Clin Exp Med. 2023 Nov;23(7):3251-3264. doi: 10.1007/s10238-023-01038-9. Epub 2023 Apr 13.

Abstract

Background: Some human polymorphisms of ACE1, ACE2, IFITM3, TMPRSS2 and TNFα genes may have an effect on the susceptibility to SARS-CoV-2 infection and increase the risk to develop severe COVID-19. We conducted a systematic review of current evidence to investigate the association of genetic variants of these genes with the susceptibility to virus infection and patient prognosis.

Methods: We systematically searched Medline, Embase and The Cochrane Library for articles published until May 2022, and included observational studies covering genetic association of ACE1, ACE2, IFITM3, TMPRSS2 and TNFα genes with COVID-19 susceptibility or prognosis. We evaluated the methodological quality of included studies, and pooled data as convenient in meta-analysis (MA). Odds ratio (OR) values and 95% confidence intervals were calculated.

Results: We included 35 studies (20 on ACE, 5 each on IFITM3, TMPRSS2, TNFα), enrolling 21,452 participants, of them 9401 were COVID-19 confirmed cases. ACE1 rs4646994 and rs1799752, ACE2 rs2285666, TMPRSS2 rs12329760, IFITM3 rs12252 and TNFα rs1800629 were identifies as common polymorphisms. Our MA showed an association between genetic polymorphisms and susceptibility to SARS-CoV-2 infection for IFITM3 rs12252 CC (OR 5.67) and CT (OR 1.64) genotypes. Furthermore, MA uncovered that both ACE DD (OR 1.27) and IFITM3 CC (OR 2.26) genotypes carriers had a significantly increased risk of developing severe COVID-19.

Discussion: These results provide a critical evaluation of genetic polymorphisms as predictors in SARS-CoV-2 infection. ACE1 DD and IFITM3 CC polymorphisms would lead to a genetic predisposition for severe lung injury in patients with COVID-19.

Keywords: Meta-analysis; Polymorphism; SARS-CoV-2.

Publication types

  • Meta-Analysis
  • Systematic Review
  • Review

MeSH terms

  • Angiotensin-Converting Enzyme 2 / genetics
  • COVID-19* / genetics
  • COVID-19* / metabolism
  • Humans
  • Membrane Proteins / genetics
  • Peptidyl-Dipeptidase A / genetics
  • Peptidyl-Dipeptidase A / metabolism
  • Polymorphism, Genetic
  • RNA-Binding Proteins / genetics
  • SARS-CoV-2 / pathogenicity
  • Serine Endopeptidases / genetics
  • Tumor Necrosis Factor-alpha / genetics

Substances

  • Angiotensin-Converting Enzyme 2
  • IFITM3 protein, human
  • Membrane Proteins
  • Peptidyl-Dipeptidase A
  • RNA-Binding Proteins
  • Serine Endopeptidases
  • TMPRSS2 protein, human
  • Tumor Necrosis Factor-alpha