Cerebrovascular segmentation in phase-contrast magnetic resonance angiography by a Radon projection composition network

Abstract

Cerebrovascular segmentation based on phase-contrast magnetic resonance angiography (PC-MRA) provides patient-specific intracranial vascular structures for neurosurgery planning. However, the vascular complex topology and spatial sparsity make the task challenging. Inspired by the computed tomography reconstruction, this paper proposes a Radon Projection Composition Network (RPC-Net) for cerebrovascular segmentation in PC-MRA, aiming to enhance distribution probability of vessels and fully obtain the vascular topological information. Multi-directional Radon projections of the images are introduced and a two-stream network is used to learn the features of the 3D images and projections. The projection domain features are remapped to the 3D image domain by filtered back-projection transform to obtain the image-projection joint features for predicting vessel voxels. A four-fold cross-validation experiment was performed on a local dataset containing 128 PC-MRA scans. The average Dice similarity coefficient, precision and recall of the RPC-Net achieved 86.12%, 85.91% and 86.50%, respectively, while the average completeness and validity of the vessel structure were 85.50% and 92.38%, respectively. The proposed method outperformed the existing methods, especially with significant improvement on the extraction of small and low-intensity vessels. Moreover, the applicability of the segmentation for electrode trajectory planning was also validated. The results demonstrate that the RPC-Net realizes an accurate and complete cerebrovascular segmentation and has potential applications in assisting neurosurgery preoperative planning.

Keywords: Cerebrovascular segmentation; Intracranial hemorrhage; Phase-contrast magnetic resonance angiography; Radon transform; Stereotactic neurosurgery.