Identification of GC-rich LAT genes in birds

PLoS One. 2023 Apr 6;18(4):e0283431. doi: 10.1371/journal.pone.0283431. eCollection 2023.

Abstract

Linker for activation of T cells (LAT) plays a key role in T-cell antigenic signaling in mammals. Accordingly, LAT orthologues were identified in the majority of vertebrates. However, LAT orthologues were not identified in most birds. In this study, we show that LAT gene is present in genomes of multiple extant birds. It was not properly assembled previously because of its GC-rich content. LAT expression is enriched in lymphoid organs in chicken. The analysis of the coding sequences revealed a strong conservation of key signaling motifs in LAT between chicken and human. Overall, our data indicate that mammalian and avian LAT genes are functional homologues with a common role in T-cell signaling.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptor Proteins, Signal Transducing* / genetics
  • Animals
  • Chickens / genetics
  • Chickens / metabolism
  • Genome
  • Humans
  • Mammals / genetics
  • Membrane Proteins* / genetics
  • Phosphoproteins / metabolism
  • T-Lymphocytes / metabolism

Substances

  • Adaptor Proteins, Signal Transducing
  • Membrane Proteins
  • Phosphoproteins

Grants and funding

This project was supported by the National Institute of virology and bacteriology (Programme EXCELES, ID Project No. LX22NPO5103) - Funded by the European Union - Next Generation EU and Charles University Grant Agency (Project No. 984120 to SJ). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.