In-silico targeting TMPK from monkey pox virus: Molecular docking analysis, density functional theory studies and molecular dynamic simulation analysis

J Biomol Struct Dyn. 2023;41(24):14689-14701. doi: 10.1080/07391102.2023.2193998. Epub 2023 Mar 27.

Abstract

The World Health Organization (WHO) proclaimed the monkeypox epidemic a "public health emergency of worldwide significance" recently. The monkeypox virus is a member of the same Orthopoxvirus genus as the smallpox virus. Although smallpox medications are advised against monkeypox, no monkeypox-specific drugs are currently available. In the event of such an outbreak, in-silico medication identification is a practical and efficient strategy. As a result, we report a computational drug repurposing analysis to discover medicines that may be potential inhibitors of thymidylate kinase, a critical monkeypox viral enzyme. The target protein structure of the monkeypox virus was modeled using the vaccinia virus's homologous protein structure. Using molecular docking and density functional theory, we found 11 possible inhibitors of the monkeypox virus from an Asinex library of 261120 chemicals. The primary purpose of this in silico work is to find possible inhibitors of monkeypox viral proteins that can then be experimentally tested in order to develop innovative therapeutic medicines for monkeypox infection.Communicated by Ramaswamy H. Sarma.

Keywords: DFT; In silico study; Monkeypox virus; TMPK; Thymidylate kinase; molecular docking.

MeSH terms

  • Density Functional Theory
  • Humans
  • Molecular Docking Simulation
  • Molecular Dynamics Simulation
  • Monkeypox virus*
  • Mpox (monkeypox)*