Computational Prediction of Protein Intrinsically Disordered Region Related Interactions and Functions

Genes (Basel). 2023 Feb 8;14(2):432. doi: 10.3390/genes14020432.

Abstract

Intrinsically Disordered Proteins (IDPs) and Regions (IDRs) exist widely. Although without well-defined structures, they participate in many important biological processes. In addition, they are also widely related to human diseases and have become potential targets in drug discovery. However, there is a big gap between the experimental annotations related to IDPs/IDRs and their actual number. In recent decades, the computational methods related to IDPs/IDRs have been developed vigorously, including predicting IDPs/IDRs, the binding modes of IDPs/IDRs, the binding sites of IDPs/IDRs, and the molecular functions of IDPs/IDRs according to different tasks. In view of the correlation between these predictors, we have reviewed these prediction methods uniformly for the first time, summarized their computational methods and predictive performance, and discussed some problems and perspectives.

Keywords: computational prediction; functions; interactions; intrinsically disordered proteins and regions.

Publication types

  • Review
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Drug Discovery
  • Humans
  • Intrinsically Disordered Proteins* / chemistry
  • Protein Domains

Substances

  • Intrinsically Disordered Proteins

Grants and funding

This research was funded by the public computing cloud of Renmin University and the Beijing Academy of Intelligence.