Clonal Expansion of Multidrug-Resistant Streptococcus dysgalactiae Subspecies equisimilis Causing Bacteremia, Japan, 2005-2021

Emerg Infect Dis. 2023 Mar;29(3):528-539. doi: 10.3201/eid2903.221060.

Abstract

Incidence of Streptococcus dysgalactiae subspecies equisimilis (SDSE) bacteremia is increasing in the Kyoto-Shiga region of Japan. We retrospectively analyzed clinical features of SDSE bacteremia and conducted comparative genomic analyses of isolates collected from 146 bacteremia episodes among 133 patients during 2005-2021. Of those patients, 7.7% required vasopressor support, and 7.0% died while in the hospital. The prevalence of isolates resistant to erythromycin, minocycline, and clindamycin increased from 8.6% during 2005-2017 to 21.6% during 2018-2021. Our genomic analysis demonstrated that sequence type 525 and clonal complex 25 were predominant in SDSE isolates collected during 2018-2021. In addition, those isolates had acquired 2 antimicrobial-resistance genes, ermB and tetM, via Tn916-like integrative and conjugative elements (ICEs). Phylogenetic analysis revealed clonal distribution of Tn916-like ICEs in SDSE isolates. Our findings suggest that Tn916-like ICEs contributed to the emergence and recent increase of multidrug-resistant SDSE bacteremia in this region of Japan.

Keywords: Japan; SDSE; Streptococcus dysgalactiae subspecies equisimilis; antimicrobial resistance; bacteremia; bacteria; streptococci; transposase.

MeSH terms

  • Anti-Bacterial Agents
  • Bacteremia* / epidemiology
  • Humans
  • Japan / epidemiology
  • Phylogeny
  • Retrospective Studies
  • Streptococcal Infections* / epidemiology

Substances

  • Anti-Bacterial Agents

Supplementary concepts

  • Streptococcus dysgalactiae
  • Streptococcus dysgalactiae subsp. equisimilis